Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835316.1_cds_XP_016505900.1_19185
CDS Infomation

[gene=LOC107823725] [db_xref=GeneID:107823725] [protein=respiratory burst oxidase homolog protein C-like] [protein_id=XP_016505900.1] [location=join(14590..15193,15321..15483,15587..15635,15784..15897,16265..16693,17119..17502,17607..17702,18009..18124,18250..18352,19125..19198,20068..20642,21163..21272)] [gbkey=CDS]
Sequence

ATGCAAAATTCGGAAAATCATCATCCGCACCACCAGCACCACCATTCGGACACAGAGATA
ATTGGAAATGATAGAGCGTCGTACAGTGGTCCGTTAAGCGGACCGTTAAACAAACGAGGC
GGCAAAAAGAGTGCGAGATTTAACATTCCTGAATCTACCGACATCGGAACCAGTGTCGGA
ACCGGCGGCAAGTCCAATGATGATGCGTACGTTGAAATCACTCTCGATGTCCGCGAAGAT
TCCGTCGCTGTCCACAGTGTCAAAACTGCCGGCGGTGATGACGTGGAAGATCCCGAGCTG
GCTTTATTGGCTAAAGGCTTAGAGAAGAAGTCCACTTTAGGATCTTCACTTGTTCGAAAT
GCTTCGTCTAGAATTCGGCAAGTGTCACAAGAGCTCAGGCGTTTGGCTTCCTTAAATAAA
CGCCCAATTCCTACTGGAAGGTTCGACAGGAATAAATCAGCTGCTGCTCATGCTCTTAAA
GGTCTCAAGTTTATTAGTAAGACCGACGGCGGCGCTGGTTGGGCCGCCGTCGAGAAGCGG
TTCGATGAGATTACTGCTTCTACTACTGGTTTGCTTCCTCGTGCCAAATTTGGAGAATGT
ATAGGTATGAATAAGGAGTCTAAGGAATTTGCTGTTGAGCTATATGATGCGCTAGCTCGG
AGGAGAAACATTACAACTGATTCCATTAACAAAGCACAGCTCAAAGAGTTCTGGGACCAA
GTGGCTGACCAAAGTTTTGATTCTCGCCTTCAAACATTTTTTGACATGGTTGATAAAGAT
GCTGATGGTAGAATTACAGAAGAAGAAGTCAGAGAGATTATAGGCCTTAGCGCGTCGGCC
AACAGGCTGTCAACAATCCAGAAACAAGCTGATGAATACGCAGCAATGATCATGGAAGAG
TTGGATCCTAACAACCTCGGATACATTATGATTGAGAACTTGGAAATGCTTTTACTGCAA
GCACCAAATCAATCAGTGCAAAGAGGAGGCGAAAGTCGGAACTTGAGTCAAATGCTAAGT
CAAAAACTAAAGCATACACAAGAGAGAAATCCAATAGTAAGATGGTACAAGAGTTTCATG
TACTTTTTGCTGGATAATTGGCAAAGAGTTTGGGTATTGTTACTGTGGATTGGAATTATG
GCTGGTCTATTTACATGGAAATATATACAGTATAAAGAAAAAGCTGCATATAAAGTCATG
GGTCCCTGTGTGTGTTTTGCCAAAGGTGCTGCTGAAACACTCAAGCTCAACATGGCAATT
ATTTTATTTCCGGTTTGCAGAAACACGATCACATGGCTTCGAAATAAGACCAGATTAGGT
GCTGCTGTTCCTTTTGATGATAACCTTAATTTTCACAAAGTGATAGCAGTGGCAATTGCT
CTTGGGGTTGGAATACACGGACTATCTCACTTGACATGTGATTTTCCTCGGCTTTTAAAT
GCTAGTGAAGAAGAATATGAACCAATGAAGTACTATTTTGGAGATCAGCCAGAAAGCTAT
TGGTGGTTTATAAAAGGAGTAGAAGGGGTAACTGGAATTATAATGGTGGTTTTAATGGCA
ATAGCATTTACTCTAGCAACCCCATGGTTTAGAAGGAATAGAGTTAGTTTGCCAAAACCA
TTTCACAAACTCACTGGATTTAATGCCTTTTGGTACTCTCACCATCTCTTTGTTATTGTC
TACACTCTGTTCATTGTGCATGGTGAAAAGCTATACATTACCAAAGATTGGTACAAGAGA
ACGACATGGATGTACTTAACTATCCCAATCATACTCTATGCTAGTGAAAGGTTGATTAGG
GCATTCAGGTCAAGCATTAAAGCTGTTAAGATTTTGAAGGTGGCAGTATATCCAGGAAAT
GTGTTGGCACTTCACATGTCAAAACCACAGGGCTACAAATACAAAAGTGGGCAATACATG
TTTGTCAACTGTGCTGCAGTTTCTCCATTTGAGTGGCATCCATTTTCAATTACTTCGGCC
CCAGGAGATGACTATCTCAGTGTCCATATTCGAACTCTTGGTGATTGGACCAGACAACTT
AAAACTGTTTTCTCCGAGGTTTGCCAGCCACCACCTAATGGAAAAAGTGGACTCCTCAGA
GCTGACTACTTGCAAGGAGAGAATAATCCTAATTTCCCAAGGGTGTTAATAGATGGACCA
TATGGAGCACCAGCACAAGACTACAAGAAATATGAGGTGGTTTTGTTGGTAGGTCTTGGA
ATTGGAGCTACACCAATGATCAGTATTGTTAAAGACATTGTCAACAACATGAAGGCAATG
GACGAAGAAGAAAATTCCTTGGAAGATGGACACAATAATAATATGGCACCAAATTCTAGC
CCCAATATTGCAAAAAATAAGGGTAATAAATCAGGTTCAGCAAGTGGAGGAAATAATTTC
AATACAAGGAGAGCATATTTCTATTGGGTTACTAGAGAACAAGGTTCATTTGATTGGTTC
AAAGGTATAATGAATGAAGCTGCTGAAATGGACCATAAGGGAGTAATTGAAATGCATAAT
TATTGTACTAGTGTTTATGAAGAAGGTGATGCTCGTTCTGCTCTTATTACTATGCTTCAG
TCTCTTCACCATGCCAAAAATGGTGTTGACATTGTCTCTGGCACCAGAGTTAAGTCACAT
TTTGCTAAACCTAATTGGCGTAATGTCTACAAACGCATTGCTCTCAACCACCCTGAGGCT
AAAGTTGGGGTCTTCTATTGTGGGGCACCAGCACTGACCAAAGAACTAAGACAACACGCC
TTGGATTTTTCACACAAGACATCTACCAAGTTTGATTTCCATAAAGAAAATTTTTGA

Peptide Sequence

PEP ID

XP_016505900.1
PEP Infomation

PREDICTED: respiratory burst oxidase homolog protein C-like [Nicotiana tabacum]
Sequence

MQNSENHHPHHQHHHSDTEIIGNDRASYSGPLSGPLNKRGGKKSARFNIPESTDIGTSVG
TGGKSNDDAYVEITLDVREDSVAVHSVKTAGGDDVEDPELALLAKGLEKKSTLGSSLVRN
ASSRIRQVSQELRRLASLNKRPIPTGRFDRNKSAAAHALKGLKFISKTDGGAGWAAVEKR
FDEITASTTGLLPRAKFGECIGMNKESKEFAVELYDALARRRNITTDSINKAQLKEFWDQ
VADQSFDSRLQTFFDMVDKDADGRITEEEVREIIGLSASANRLSTIQKQADEYAAMIMEE
LDPNNLGYIMIENLEMLLLQAPNQSVQRGGESRNLSQMLSQKLKHTQERNPIVRWYKSFM
YFLLDNWQRVWVLLLWIGIMAGLFTWKYIQYKEKAAYKVMGPCVCFAKGAAETLKLNMAI
ILFPVCRNTITWLRNKTRLGAAVPFDDNLNFHKVIAVAIALGVGIHGLSHLTCDFPRLLN
ASEEEYEPMKYYFGDQPESYWWFIKGVEGVTGIIMVVLMAIAFTLATPWFRRNRVSLPKP
FHKLTGFNAFWYSHHLFVIVYTLFIVHGEKLYITKDWYKRTTWMYLTIPIILYASERLIR
AFRSSIKAVKILKVAVYPGNVLALHMSKPQGYKYKSGQYMFVNCAAVSPFEWHPFSITSA
PGDDYLSVHIRTLGDWTRQLKTVFSEVCQPPPNGKSGLLRADYLQGENNPNFPRVLIDGP
YGAPAQDYKKYEVVLLVGLGIGATPMISIVKDIVNNMKAMDEEENSLEDGHNNNMAPNSS
PNIAKNKGNKSGSASGGNNFNTRRAYFYWVTREQGSFDWFKGIMNEAAEMDHKGVIEMHN
YCTSVYEEGDARSALITMLQSLHHAKNGVDIVSGTRVKSHFAKPNWRNVYKRIALNHPEA
KVGVFYCGAPALTKELRQHALDFSHKTSTKFDFHKENF

Transcript Sequence

Gene sequence data has not been registered.